STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliYFlagellar motor switch protein FliY; Pfam match to PF01052.11 SpoA. (279 aa)    
Predicted Functional Partners:
flgE1
Flagellar hook protein FlgE; Pfam matches to PF00460.11 Flg_bb_rod, and to PF07559.5 FlaE.
 
 
 0.999
fliM
Flagellar motor switch protein FliM; Pfam match to PF02154.6 FliM.
 
 0.999
fliG
Flagellar motor switch protein FliG; Pfam match to PF01706.7 FliG_C.
 
 0.999
cheA
Chemotaxis protein CheA; Pfam matches to PF01627.14 Hpt, and to PF02895.5 H-kinase_dim.
 
 
 0.999
fliN
Flagellar motor switch protein FliN; Pfam match to PF01052.11 SpoA.
 
 0.998
flgK
Flagellar hook-associated protein FlgK; Pfam matches to PF00460.11 Flg_bb_rod, and to PF06429.4 DUF1078; Belongs to the flagella basal body rod proteins family.
 
 
 0.998
flgC
Flagellar proximal rod protein FlgC; Pfam matches to PF00460.11 Flg_bb_rod, and to PF06429.4 DUF1078; Belongs to the flagella basal body rod proteins family.
 
 
 0.998
cheV
Chemotaxis protein CheV; Pfam matches to PF01584.10 CheW, and to PF00072.15 Response_reg.
 
  
 0.991
fliI
Flagellum-specific ATP synthase FliI; Pfam match to PF00006.16 ATP-synt_ab.
 
 
 0.991
flhF
Flagellar biosynthesis (GTP-binding) protein FlhF; Pfam match to PF00448.13 SRP54.
 
 
 0.990
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.