STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
feoBFerrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. (674 aa)    
Predicted Functional Partners:
feoA
Ferrous iron transport protein A, putative; Pfam match to PF04023.5 FeoA.
  
  
 0.979
purB2
Pfam match to PF00206.11 Lyase_1; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.691
metC
Cystathionase beta-lyase; Pfam match to PF01053.11 Cys_Met_Meta_PP.
     
 0.668
exbB2
TonB system transport protein ExbB; Pfam match to PF01618.7 MotA_ExbB.
   
  
 0.623
exbD2
TonB system transport protein ExbD; Pfam match to PF02472.7 ExbD.
   
  
 0.617
tonB1
TonB domain protein.
   
  
 0.615
cfrA
Iron-regulated outer membrane virulence protein, TonB receptor CfrA; Pfam matches to PF07715.6 Plug, and to PF00593.15 TonB_dep_Rec.
      
 0.584
Cla_0281
MmgE/PrpD family protein; Pfam match to PF03972.5 MmgE_PrpD.
       0.555
por
Pyruvate ferredoxin/flavodoxin oxidoreductase; Pfam matches to PF01855.10 POR_N, and to PF01558.9 POR.
 
   
 0.549
cfiP
Endoribonuclease L-PSP, putative; Pfam match to PF01042.12 Ribonuc_L-PSP.
       0.538
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.