STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdSType I restriction-modification system, S subunit; Pfam matches to PF01420.10 Methylase_S, and to PF01420.10 Methylase_S. (390 aa)    
Predicted Functional Partners:
hsdR
Type I restriction-modification system, R subunit; Pfam matches to PF04313.5 HSDR_N, and to PF04851.6 ResIII.
 
 
 0.985
mloC
Conserved hypothetical protein.
 
    0.860
rloE
Conserved hypothetical protein.
       0.773
rloG
Conserved hypothetical protein.
       0.773
Cla_0005
Conserved hypothetical protein (DUF511 domain protein); Pfam match to PF04373.4 DUF511.
 
    0.736
mcrB
Conserved hypothetical protein, putative ATPase, AAA family; Pfam match to PF07728.5 AAA_5.
 
  
 0.633
Cla_0343
NADP-dependent alcohol dehydrogenase; Pfam matches to PF08240.3 ADH_N, and to PF00107.17 ADH_zinc_N.
       0.532
Cla_0558
Type II restriction-modification enzyme.
   
    0.476
Cla_0009
Possible outer membrane protein.
   
    0.470
Cla_0838
Conserved hypothetical protein, KAP family; Pfam match to PF07693.5 KAP_NTPase.
 
     0.453
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.