Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cla_0395Conserved hypothetical protein; Pfam match to PF09674.1 CHP02757. (249 aa)    
Predicted Functional Partners:
Cla_0394
Conserved hypothetical integral membrane protein (DUF81 domain protein); Pfam match to PF01925.10 DUF81.
       0.825
flgK
Flagellar hook-associated protein FlgK; Pfam matches to PF00460.11 Flg_bb_rod, and to PF06429.4 DUF1078; Belongs to the flagella basal body rod proteins family.
       0.825
flgN
Conserved hypothetical protein.
       0.821
flgM
Conserved hypothetical protein.
       0.719
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
 
 
 0.702
xth
Exodeoxyribonuclease III; Pfam match to PF03372.14 Exo_endo_phos.
   
 0.675
Cla_0399
Conserved hypothetical protein.
       0.612
flgI
Flagellar P-ring protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
       0.612
Cla_0401
Conserved hypothetical protein, putative methylase; Pfam match to PF03602.6 Cons_hypoth95.
       0.537
Cla_0402
Conserved hypothetical protein.
       0.537
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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