STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bisCBiotin sulfoxide reductase; Pfam matches to PF00384.13 Molybdopterin, and to PF01568.12 Molydop_binding; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (799 aa)    
Predicted Functional Partners:
Cla_0431
Conserved hypothetical protein.
  
 
 0.926
fdhB
Formate dehydrogenase, beta (iron-sulfur) subunit; Pfam match to PF00037.18 Fer4.
 
 
 0.921
torA
Trimethylamine N-oxide reductase, catalytic subunit; Pfam matches to PF00384.13 Molybdopterin, and to PF01568.12 Molydop_binding; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 
0.909
torC
Trimethylamine N-oxide reductase, cytochrome c-type subunit.
 
 
 0.903
napG
Fe-S ferredoxin-type protein; Pfam match to PF00037.18 Fer4.
 
 
 0.864
Cla_0432
Conserved hypothetical integral membrane protein.
       0.786
Cla_0433
Conserved hypothetical protein; Pfam match to PF07963.3 N_methyl.
       0.780
napB
Periplasmic nitrate reductase, small subunit, cytochrome c-type protein; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
 
 
 0.757
napD
Periplasmic nitrate reductase assembly protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.
  
 
 0.726
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.680
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.