STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
modBMolybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (225 aa)    
Predicted Functional Partners:
modA
Molybdenum ABC transporter, periplasmic molybdate-binding protein; Pfam match to PF01547.16 SBP_bac_1.
 
 
 0.995
modC
Molybdenum ABC transporter, ATP-binding protein; Pfam match to PF00005.18 ABC_tran.
 
 0.991
Cla_1524
ABC transporter, ATP-binding protein; Pfam match to PF00005.18 ABC_tran; Belongs to the ABC transporter superfamily.
  
 0.755
Cla_0458
Saccharopine dehydrogenase; Pfam match to PF03435.9 Saccharop_dh.
       0.710
Cla_1283
Conserved hypothetical protein.
  
  
 0.492
Cla_0456
Transmembrane transport protein, SbmA/BacA family; Pfam match to PF05992.3 SbmA_BacA.
       0.478
Cla_0457
Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.454
Cla_0360
Putative transcriptional regulator, ModE family; Pfam match to PF00126.18 HTH_1.
 
   
 0.443
iscU
NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
     
 0.406
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.