STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lolAOuter membrane lipoprotein carrier protein, LolA family; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). (168 aa)    
Predicted Functional Partners:
Cla_0960
Conserved hypothetical lipoprotein.
 
   
 0.815
ybgF
Conserved hypothetical protein.
 
    0.808
mreC
Rod shape-determining protein MreC.
 
   
 0.794
tsaB
Conserved hypothetical protein.
 
     0.779
ctsW
Conserved hypothetical protein, possible purine/pyrimidine phosphoribosyltransferase.
 
     0.774
Cla_0549
Conserved hypothetical protein.
  
     0.764
Cla_0940
Conserved hypothetical protein.
  
     0.763
Cla_0995
Conserved hypothetical protein.
  
     0.760
Cla_0695
TrkA domain protein; Pfam match to PF02080.12 TrkA_C.
  
     0.759
holB
Putative DNA polymerase III delta prime subunit HolB.
  
   0.758
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.