STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cla_05574-hydroxybenzoyl-CoA thioesterase family protein; Pfam match to PF03061.13 4HBT. (126 aa)    
Predicted Functional Partners:
Cla_0558
Type II restriction-modification enzyme.
       0.610
fabD
Malonyl CoA-acyl carrier protein transacylase.
   
 
 0.601
acpP1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.499
dsbA
Thiol:disulfide interchange protein, DsbA family.
       0.466
por
Pyruvate ferredoxin/flavodoxin oxidoreductase; Pfam matches to PF01855.10 POR_N, and to PF01558.9 POR.
     
 0.464
aas
Pfam matches to PF07690.7 MFS_1, and to PF01553.12 Acyltransferase.
  
  
 0.442
tolB
Translocation protein TolB precursor; Pfam match to PF04052.4 TolB_N.
 
   
 0.419
secA
Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
   
   0.410
fliA
Flagellar biosynthesis sigma factor, sigma-F; Pfam matches to PF04542.5 Sigma70_r2, and to PF04545.7 Sigma70_r4; Belongs to the sigma-70 factor family.
    
   0.406
fliG
Flagellar motor switch protein FliG; Pfam match to PF01706.7 FliG_C.
    
   0.406
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.