pepD protein (Campylobacter lari) - STRING interaction network

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Score

pepD

Aminoacyl-histidine dipeptidase. (422 aa)

Predicted Functional Partners:

pepA

0.917

glyA

0.874

metC

0.816

aspB

0.816

cysK

0.801

Cla_0563

0.630

Cla_0564

0.627

pepQ

0.493

por

0.472

Cla_0561

0.469

Your Current Organism:

Campylobacter lari

NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cla_0561	pepD	Cla_0561	Cla_0562	C4-dicarboxylate transporter, anaerobic; Possible pseudogene; Pfam match to PF03605.5 DcuA_DcuB.	Aminoacyl-histidine dipeptidase.	0.469
Cla_0563	Cla_0564	Cla_0563	Cla_0564	Thermonuclease family protein (Snase-like); Pfam match to PF00565.8 SNase.	Conserved hypothetical protein.	0.800
Cla_0563	pepD	Cla_0563	Cla_0562	Thermonuclease family protein (Snase-like); Pfam match to PF00565.8 SNase.	Aminoacyl-histidine dipeptidase.	0.630
Cla_0564	Cla_0563	Cla_0564	Cla_0563	Conserved hypothetical protein.	Thermonuclease family protein (Snase-like); Pfam match to PF00565.8 SNase.	0.800
Cla_0564	pepD	Cla_0564	Cla_0562	Conserved hypothetical protein.	Aminoacyl-histidine dipeptidase.	0.627
aspB	cysK	Cla_0583	Cla_1224	Aspartate aminotransferase; Pfam match to PF00155.12 Aminotran_1_2.	Cysteine synthase A; Pfam match to PF00291.16 PALP; Belongs to the cysteine synthase/cystathionine beta- synthase family.	0.912
aspB	metC	Cla_0583	Cla_0279	Aspartate aminotransferase; Pfam match to PF00155.12 Aminotran_1_2.	Cystathionase beta-lyase; Pfam match to PF01053.11 Cys_Met_Meta_PP.	0.924
aspB	pepA	Cla_0583	Cla_0678	Aspartate aminotransferase; Pfam match to PF00155.12 Aminotran_1_2.	Aminopeptidase, M17 family; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.	0.816
aspB	pepD	Cla_0583	Cla_0562	Aspartate aminotransferase; Pfam match to PF00155.12 Aminotran_1_2.	Aminoacyl-histidine dipeptidase.	0.816
aspB	por	Cla_0583	Cla_0388	Aspartate aminotransferase; Pfam match to PF00155.12 Aminotran_1_2.	Pyruvate ferredoxin/flavodoxin oxidoreductase; Pfam matches to PF01855.10 POR_N, and to PF01558.9 POR.	0.499
cysK	aspB	Cla_1224	Cla_0583	Cysteine synthase A; Pfam match to PF00291.16 PALP; Belongs to the cysteine synthase/cystathionine beta- synthase family.	Aspartate aminotransferase; Pfam match to PF00155.12 Aminotran_1_2.	0.912
cysK	metC	Cla_1224	Cla_0279	Cysteine synthase A; Pfam match to PF00291.16 PALP; Belongs to the cysteine synthase/cystathionine beta- synthase family.	Cystathionase beta-lyase; Pfam match to PF01053.11 Cys_Met_Meta_PP.	0.990
cysK	pepA	Cla_1224	Cla_0678	Cysteine synthase A; Pfam match to PF00291.16 PALP; Belongs to the cysteine synthase/cystathionine beta- synthase family.	Aminopeptidase, M17 family; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.	0.831
cysK	pepD	Cla_1224	Cla_0562	Cysteine synthase A; Pfam match to PF00291.16 PALP; Belongs to the cysteine synthase/cystathionine beta- synthase family.	Aminoacyl-histidine dipeptidase.	0.801
cysK	por	Cla_1224	Cla_0388	Cysteine synthase A; Pfam match to PF00291.16 PALP; Belongs to the cysteine synthase/cystathionine beta- synthase family.	Pyruvate ferredoxin/flavodoxin oxidoreductase; Pfam matches to PF01855.10 POR_N, and to PF01558.9 POR.	0.493
glyA	pepA	Cla_0489	Cla_0678	Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.	Aminopeptidase, M17 family; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.	0.823
glyA	pepD	Cla_0489	Cla_0562	Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.	Aminoacyl-histidine dipeptidase.	0.874
glyA	por	Cla_0489	Cla_0388	Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.	Pyruvate ferredoxin/flavodoxin oxidoreductase; Pfam matches to PF01855.10 POR_N, and to PF01558.9 POR.	0.626
metC	aspB	Cla_0279	Cla_0583	Cystathionase beta-lyase; Pfam match to PF01053.11 Cys_Met_Meta_PP.	Aspartate aminotransferase; Pfam match to PF00155.12 Aminotran_1_2.	0.924
metC	cysK	Cla_0279	Cla_1224	Cystathionase beta-lyase; Pfam match to PF01053.11 Cys_Met_Meta_PP.	Cysteine synthase A; Pfam match to PF00291.16 PALP; Belongs to the cysteine synthase/cystathionine beta- synthase family.	0.990