Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hyaANi/Fe-hydrogenase, small subunit; Pfam matches to PF08425.1 NiFe_dehyd_N, and to PF01058.13 Oxidored_q6. (379 aa)    
Predicted Functional Partners:
hyaB
Ni/Fe-hydrogenase, large subunit; Pfam match to PF00374.10 NiFeSe_Hases; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 
 0.997
hyaC
Ni/Fe hydrogenase, cytochrome b subunit; Pfam match to PF01292.11 Ni_hydr_CYTB.
 
 
 0.985
hyaD
Ni/Fe hydrogenase, expression/formation protein; Pfam match to PF01750.9 HycI.
 
  
 0.965
clpB
Protein disaggregating chaperone ClpB; Pfam matches to PF02861.11 Clp_N, and to PF00004.20 AAA; Belongs to the ClpA/ClpB family.
       0.580
hydA
Quinone-reactive Ni/Fe-hydrogenase, small subunit; Pfam matches to PF08425.1 NiFe_dehyd_N, and to PF01058.13 Oxidored_q6.
  
  
 
0.571
hypC
Hydrogenase assembly chaperone HypC; Pfam match to PF01455.9 HupF_HypC.
 
 
 0.512
hypB
Hydrogenase accessory protein HypB; Pfam match to PF02492.10 cobW.
 
  
 0.505
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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