Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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msrAPeptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (168 aa)    
Predicted Functional Partners:
hypA
Hydrogenase expression/formation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
  
    0.822
hypB
Hydrogenase accessory protein HypB; Pfam match to PF02492.10 cobW.
  
    0.813
hypE
Hydrogenase expression/formation protein HypE; Pfam matches to PF00586.15 AIRS, and to PF02769.13 AIRS_C.
       0.812
hypD
Hydrogenase expression/formation protein HypD; Pfam match to PF01924.7 HypD; Belongs to the HypD family.
       0.812
hypC
Hydrogenase assembly chaperone HypC; Pfam match to PF01455.9 HupF_HypC.
       0.812
dsbD
Thiol:disulfide interchange protein DsbD; Pfam match to PF02683.6 DsbD.
    
 
 0.704
Cla_1212
Conserved hypothetical lipoprotein; Pfam match to PF00578.12 AhpC-TSA.
 
 
 0.677
trxB
Thioredoxin reductase; Pfam match to PF07992.5 Pyr_redox_2.
     
 0.675
aspA
Aspartate ammonia-lyase; Pfam match to PF00206.11 Lyase_1.
      
 0.662
trxC
Possible periplasmic thioredoxin; Pfam match to PF00085.11 Thioredoxin.
   
 0.634
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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