STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cla_0806Cytochrome c family protein; Respiratory sulfite reductase that catalyzes the reduction of sulfite to sulfide in a single step, consuming six electrons in the process; Belongs to the multiheme cytochrome c family. (645 aa)    
Predicted Functional Partners:
Cla_0808
Conserved hypothetical lipoprotein.
 
     0.698
Cla_0807
Cytochrome c family protein.
       0.681
Cla_0809
Cytochrome c biogenesis protein; Pfam match to PF01578.11 Cytochrom_C_asm.
     
 0.628
Cla_0139
Anaerobic C4-dicarboxylate transporter; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.
  
     0.580
astA
Arylsulfate sulfotransferase; Pfam match to PF05935.2 Arylsulfotrans.
  
    0.545
Cla_0561
C4-dicarboxylate transporter, anaerobic; Possible pseudogene; Pfam match to PF03605.5 DcuA_DcuB.
  
     0.540
Cla_0805
Conserved hypothetical protein, putative peptidase S24; Pfam match to PF00717.14 Peptidase_S24.
  
    0.501
Cla_1378
Putative C4-dicarboxylate transporter; Pfam match to PF03606.6 DcuC.
  
     0.476
frdC
Fumarate reductase, cytochrome b subunit; Pfam match to PF02967.5 Fum_red_TM.
  
     0.411
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.