Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cla_0810Hypothetical protein. (74 aa)    
Predicted Functional Partners:
lpxD
UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
       0.825
ilvH
Acetolactate synthase III, valine-sensitive, small subunit; Pfam match to PF01842.16 ACT.
       0.825
ilvB
Acetolactate synthase III, valine-sensitive, large subunit; Pfam matches to PF02776.9 TPP_enzyme_N, and to PF00205.13 TPP_enzyme_M.
       0.825
oorC
2-oxoglutarate:acceptor oxidoreductase, OorC subunit; Pfam match to PF01558.9 POR.
       0.645
oorB
2-oxoglutarate:acceptor oxidoreductase, OorB subunit; Pfam match to PF02775.12 TPP_enzyme_C.
       0.645
oorA
2-oxoglutarate:acceptor oxidoreductase, OorA subunit; Pfam match to PF01855.10 POR_N.
       0.645
oorD
2-oxoglutarate:acceptor oxidoreductase, OorD subunit; Pfam matches to PF00037.18 Fer4, and to PF00037.18 Fer4.
       0.645
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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