STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cla_0911Chemotaxis protein MotB, putative; Pfam match to PF00691.11 OmpA. (316 aa)    
Predicted Functional Partners:
motB
Flagellar motor component MotB; Pfam match to PF00691.11 OmpA.
  
 0.952
Cla_0912
Conserved hypothetical protein.
 
 
   0.938
motA
Flagellar motor component MotA; Pfam match to PF01618.7 MotA_ExbB.
    
 0.810
tolB
Translocation protein TolB precursor; Pfam match to PF04052.4 TolB_N.
  
 
 0.785
peb4
Major antigenic peptide PEB-cell binding factor; Pfam match to PF00639.12 Rotamase.
 
   
 0.725
por
Pyruvate ferredoxin/flavodoxin oxidoreductase; Pfam matches to PF01855.10 POR_N, and to PF01558.9 POR.
  
   0.698
pflA
Paralysed flagella protein PflA.
   
 
 0.679
flgE1
Flagellar hook protein FlgE; Pfam matches to PF00460.11 Flg_bb_rod, and to PF07559.5 FlaE.
  
 
 0.661
ftsX
Cell division protein FtsX.
   
 
 0.654
fba
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
  
    0.647
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.