STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cla_0940Conserved hypothetical protein. (350 aa)    
Predicted Functional Partners:
Cla_0938
Conserved hypothetical protein.
       0.804
Cla_0939
Conserved hypothetical protein.
       0.804
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
       0.804
Cla_0942
Transcriptional regulator, BadM/Rrf2 family; Pfam match to PF02082.11 Rrf2.
       0.804
Cla_1510
Conserved hypothetical protein (RDD domain protein); Pfam match to PF06271.3 RDD.
  
     0.774
Cla_0960
Conserved hypothetical lipoprotein.
  
    0.773
ctsW
Conserved hypothetical protein, possible purine/pyrimidine phosphoribosyltransferase.
  
     0.772
Cla_0995
Conserved hypothetical protein.
  
     0.767
holA
Conserved hypothetical protein; Pfam match to PF06144.4 DNA_pol3_delta.
  
     0.766
lolA
Outer membrane lipoprotein carrier protein, LolA family; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
     0.763
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.