STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
napDPeriplasmic nitrate reductase assembly protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export. (111 aa)    
Predicted Functional Partners:
napL
Periplasmic protein NapL.
 
  
 0.988
napH
Methylamine utilization ferredoxin-type protein; Pfam match to PF00037.18 Fer4.
  
  
 0.986
napA
Periplasmic nitrate reductase, large subunit; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.
  
 
 0.983
napB
Periplasmic nitrate reductase, small subunit, cytochrome c-type protein; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
  
  
 0.964
fdhA
Formate dehydrogenase, alpha subunit (selenocysteine-containing); Pfam matches to PF04879.7 Molybdop_Fe4S4, and to PF00384.13 Molybdopterin; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.921
napG
Fe-S ferredoxin-type protein; Pfam match to PF00037.18 Fer4.
  
  
 0.918
Cla_1285
Iron-sulfur cluster-binding domain protein, putative ferridoxin; Pfam match to PF00037.18 Fer4.
  
  
 0.895
tpx
Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
      
 0.835
Cla_1012
Conserved hypothetical protein.
       0.804
Cla_1011
Major facilitator superfamily transporter; Pfam match to PF07690.7 MFS_1.
       0.786
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.