trxC protein (Campylobacter lari) - STRING interaction network

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Score

trxC

Possible periplasmic thioredoxin; Pfam match to PF00085.11 Thioredoxin. (205 aa)

Predicted Functional Partners:

clpA

0.836

fliY

0.832

clpS

0.825

aat

0.825

csrA

0.814

pyrB

0.804

pepF

0.804

Cla_1055

0.804

uvrD

0.804

truB

0.804

Your Current Organism:

Campylobacter lari

NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cla_1055	aat	Cla_1055	Cla_1064	Conserved hypothetical protein.	leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.	0.746
Cla_1055	clpA	Cla_1055	Cla_1063	Conserved hypothetical protein.	ATP-dependent ClpAP protease, ATP-binding subunit ClpA; Pfam matches to PF00004.20 AAA, and to PF07724.5 AAA_2; Belongs to the ClpA/ClpB family.	0.751
Cla_1055	clpS	Cla_1055	Cla_1062	Conserved hypothetical protein.	ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.	0.755
Cla_1055	csrA	Cla_1055	Cla_1058	Conserved hypothetical protein.	Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.	0.825
Cla_1055	pepF	Cla_1055	Cla_1054	Conserved hypothetical protein.	Pfam matches to PF08439.1 Peptidase_M3_N, and to PF01432.11 Peptidase_M3.	0.825
Cla_1055	pyrB	Cla_1055	Cla_1053	Conserved hypothetical protein.	Aspartate carbamoyltransferase; Pfam matches to PF02729.12 OTCace_N, and to PF00185.15 OTCace; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.	0.825
Cla_1055	truB	Cla_1055	Cla_1057	Conserved hypothetical protein.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.825
Cla_1055	trxC	Cla_1055	Cla_1061	Conserved hypothetical protein.	Possible periplasmic thioredoxin; Pfam match to PF00085.11 Thioredoxin.	0.804
Cla_1055	uvrD	Cla_1055	Cla_1056	Conserved hypothetical protein.	ATP-dependent DNA helicase; Pfam match to PF00580.12 UvrD-helicase.	0.825
aat	Cla_1055	Cla_1064	Cla_1055	leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.	Conserved hypothetical protein.	0.746
aat	clpA	Cla_1064	Cla_1063	leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.	ATP-dependent ClpAP protease, ATP-binding subunit ClpA; Pfam matches to PF00004.20 AAA, and to PF07724.5 AAA_2; Belongs to the ClpA/ClpB family.	0.856
aat	clpS	Cla_1064	Cla_1062	leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.	ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.	0.958
aat	csrA	Cla_1064	Cla_1058	leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.	Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.	0.759
aat	pepF	Cla_1064	Cla_1054	leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.	Pfam matches to PF08439.1 Peptidase_M3_N, and to PF01432.11 Peptidase_M3.	0.746
aat	pyrB	Cla_1064	Cla_1053	leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.	Aspartate carbamoyltransferase; Pfam matches to PF02729.12 OTCace_N, and to PF00185.15 OTCace; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.	0.758
aat	truB	Cla_1064	Cla_1057	leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.	tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.	0.759
aat	trxC	Cla_1064	Cla_1061	leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.	Possible periplasmic thioredoxin; Pfam match to PF00085.11 Thioredoxin.	0.825
aat	uvrD	Cla_1064	Cla_1056	leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.	ATP-dependent DNA helicase; Pfam match to PF00580.12 UvrD-helicase.	0.759
clpA	Cla_1055	Cla_1063	Cla_1055	ATP-dependent ClpAP protease, ATP-binding subunit ClpA; Pfam matches to PF00004.20 AAA, and to PF07724.5 AAA_2; Belongs to the ClpA/ClpB family.	Conserved hypothetical protein.	0.751
clpA	aat	Cla_1063	Cla_1064	ATP-dependent ClpAP protease, ATP-binding subunit ClpA; Pfam matches to PF00004.20 AAA, and to PF07724.5 AAA_2; Belongs to the ClpA/ClpB family.	leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.	0.856