STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pglFUDP-GlcNAc C4,6 dehydratase; Pfam match to PF02719.6 Polysacc_synt_2. (587 aa)    
Predicted Functional Partners:
pglE
UDP-4-keto-6-deoxy-GlcNAc C4 aminotransferase; Pfam match to PF01041.8 DegT_DnrJ_EryC1; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.999
pglC
Galactosyltransferase; Pfam match to PF02397.7 Bac_transf.
 
  
 0.981
pglD
UDP-4-amino-sugar N-acetyltransferase.
 
  
 0.977
pglA
GalNAc alpha-1,3-transferase; Pfam match to PF00534.11 Glycos_transf_1.
 
  
 0.975
pglH
GalNAc alpha-1,4-transferase; Pfam match to PF00534.11 Glycos_transf_1.
 
  
 0.972
pglJ
GalNAc alpha-1,4-transferase; Pfam match to PF00534.11 Glycos_transf_1.
 
  
 0.940
pseB
UDP-GlcNAc C6-dehydratase/C4-reductase; Pfam match to PF02719.6 Polysacc_synt_2.
  
  
 
0.922
glmU
UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family.
    
 0.913
pglK
ABC transporter, ATP-binding protein/permease, glycan transport; Pfam match to PF00005.18 ABC_tran.
     
 0.911
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
    
 0.905
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.