STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cla_1264Conserved hypothetical integral membrane protein. (184 aa)    
Predicted Functional Partners:
prmA
Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
       0.604
ftsH2
Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
       0.604
Cla_1262
Phosphatidylserine decarboxylase related protein.
       0.604
pssA
CDP-diacylglycerol--serine O-phosphatidyltransferase; Pfam match to PF01066.12 CDP-OH_P_transf; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.604
cheY
Chemotaxis protein CheY; Pfam match to PF00072.15 Response_reg.
       0.585
dinP
UV damage repair protein, ImpB/MucB/SamB family; Pfam match to PF00817.11 IMS.
       0.485
Cla_1267
Conserved hypothetical protein.
       0.485
galE
UDP-glucose 4-epimerase; Pfam match to PF01370.12 Epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
       0.404
pglH
GalNAc alpha-1,4-transferase; Pfam match to PF00534.11 Glycos_transf_1.
  
    0.404
pglJ
GalNAc alpha-1,4-transferase; Pfam match to PF00534.11 Glycos_transf_1.
  
    0.404
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.