Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
modAMolybdenum ABC transporter, periplasmic molybdate-binding protein; Pfam match to PF01547.16 SBP_bac_1. (248 aa)    
Predicted Functional Partners:
modB
Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
 0.997
modC
Molybdenum ABC transporter, ATP-binding protein; Pfam match to PF00005.18 ABC_tran.
 
  
 0.987
Cla_1283
Conserved hypothetical protein.
     
 0.852
Cla_1279
Conserved hypothetical integral membrane protein; Pfam match to PF02460.9 Patched.
       0.600
Cla_1280
Conserved hypothetical protein, putative organic solvent tolerance protein; Pfam match to PF05494.3 Tol_Tol_Ttg2.
       0.600
Cla_1281
Conserved hypothetical protein, VacJ family; Pfam match to PF04333.4 VacJ.
       0.575
iscU
NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
     
 0.403
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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