Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pseBUDP-GlcNAc C6-dehydratase/C4-reductase; Pfam match to PF02719.6 Polysacc_synt_2. (335 aa)    
Predicted Functional Partners:
pseC
Aminotransferase, DegT/DnrJ/EryC1/StrS family; Pfam match to PF01041.8 DegT_DnrJ_EryC1; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.998
pglF
UDP-GlcNAc C4,6 dehydratase; Pfam match to PF02719.6 Polysacc_synt_2.
  
  
 
0.922
glmU
UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. In the C-terminal section; belongs to the transferase hexapeptide repeat family.
    
 0.912
pseG
Nucleotidase specific for PseC product, UDP-4-amino-4,6-dideoxy-beta-L-AltNAc.
 
   
 0.894
Cla_1300
Conserved hypothetical protein.
 
     0.847
pseI
N-acetylneuraminic acid synthetase; Pfam matches to PF03102.5 NeuB, and to PF08666.3 SAF.
 
  
 0.838
fabH1
3-oxoacyl-(acyl carrier protein) synthase III; Pfam matches to PF08545.1 ACP_syn_III, and to PF08541.1 ACP_syn_III_C.
   
   0.824
Cla_1301
Conserved hypothetical protein.
       0.820
Cla_1304
Conserved hypothetical protein, putative HAD superfamily hydrolase.
       0.816
acpP3
Acyl carrier protein, putative.
       0.816
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.