Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
acpP2Acyl carrier protein, putative. (74 aa)    
Predicted Functional Partners:
acpP3
Acyl carrier protein, putative.
    
  0.980
acpP1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
     
  0.900
fabH1
3-oxoacyl-(acyl carrier protein) synthase III; Pfam matches to PF08545.1 ACP_syn_III, and to PF08541.1 ACP_syn_III_C.
  
 
 0.882
aas
Pfam matches to PF07690.7 MFS_1, and to PF01553.12 Acyltransferase.
  
 
 0.856
fabD
Malonyl CoA-acyl carrier protein transacylase.
  
 0.822
Cla_1304
Conserved hypothetical protein, putative HAD superfamily hydrolase.
       0.819
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
   
 0.818
nuoC
NADH-quinone oxidoreductase, C subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 30 kDa subunit family.
   
 0.818
Cla_1300
Conserved hypothetical protein.
       0.814
pseB
UDP-GlcNAc C6-dehydratase/C4-reductase; Pfam match to PF02719.6 Polysacc_synt_2.
       0.811
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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