STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acpP4Acyl carrier protein, putative. (74 aa)    
Predicted Functional Partners:
Cla_1314
3-oxoacyl-(acyl carrier protein) synthase III FabH2, putative.
       0.773
Cla_1311
Conserved hypothetical protein, putative amino acid adenylation domain protein; Pfam match to PF00501.19 AMP-binding.
       0.748
Cla_1310
Conserved hypothetical protein.
       0.739
Cla_1309
Conserved hypothetical protein.
       0.737
Cla_1312
Conserved hypothetical protein, formyltransferase domain protein; Pfam match to PF00551.10 Formyl_trans_N.
       0.737
Cla_1307
Conserved hypothetical protein.
       0.531
Cla_1308
Conserved hypothetical protein.
       0.531
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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