STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cla_1343Inosine-uridine preferring nucleoside hydrolase family protein; Pfam match to PF01156.10 IU_nuc_hydro. (335 aa)    
Predicted Functional Partners:
Cla_1342
Major facilitator superfamily transporter; Pfam match to PF07690.7 MFS_1.
 
  
 0.842
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.753
motB
Flagellar motor component MotB; Pfam match to PF00691.11 OmpA.
       0.544
motA
Flagellar motor component MotA; Pfam match to PF01618.7 MotA_ExbB.
       0.543
flaG
Flagellar protein FlaG; Pfam match to PF03646.6 FlaG.
    
   0.406
fliG
Flagellar motor switch protein FliG; Pfam match to PF01706.7 FliG_C.
    
   0.406
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.