STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppFPeptide ABC transporter, ATP-binding protein; Pfam match to PF00005.18 ABC_tran. (222 aa)    
Predicted Functional Partners:
dppD
Peptide ABC transporter, ATP-binding protein; Pfam match to PF00005.18 ABC_tran.
  
 
0.998
dppC
Peptide ABC transporter, permease protein; Pfam match to PF00528.13 BPD_transp_1.
 
 0.998
dppB
Peptide ABC transporter, permease protein; Pfam match to PF00528.13 BPD_transp_1.
 
 0.998
dppA
Peptide ABC transporter, periplasmic substrate-binding protein; Pfam match to PF00496.13 SBP_bac_5.
 
 
 0.996
Cla_1451
BCCT (betaine/carnitine/choline) family transporter; Pfam match to PF02028.8 BCCT; Belongs to the BCCT transporter (TC 2.A.15) family.
    
  0.962
Cla_1165
ABC transporter, ATP-binding protein; Pfam match to PF00005.18 ABC_tran.
 
    
0.911
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
    
0.897
Cla_1524
ABC transporter, ATP-binding protein; Pfam match to PF00005.18 ABC_tran; Belongs to the ABC transporter superfamily.
 
    
0.547
nuoB
NADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
       0.519
nuoA
NADH-quinone oxidoreductase, A subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.
       0.519
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.