STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
Cla_1456Conserved hypothetical integral membrane protein. (496 aa)    
Predicted Functional Partners:
Cla_1457
Type IIS restriction/modification enzyme; Fusion of CJ0031 and CJ0032.
       0.783
torC
Trimethylamine N-oxide reductase, cytochrome c-type subunit.
       0.495
torA
Trimethylamine N-oxide reductase, catalytic subunit; Pfam matches to PF00384.13 Molybdopterin, and to PF01568.12 Molydop_binding; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.495
mltD
Peptidoglycan-binding LysM:Lytic transglycosylase, catalytic (SLT family); Pfam matches to PF01464.11 SLT, and to PF01476.11 LysM.
   
 
 0.485
lldG
Conserved hypothetical protein (DUF162 domain protein); Pfam match to PF02589.6 DUF162.
       0.413
lldF
Putative iron-sulfur cluster binding protein; Pfam match to PF02589.6 DUF162.
       0.413
lldE
Cysteine-rich domain protein; Pfam matches to PF02754.7 CCG, and to PF02754.7 CCG.
       0.413
lctP
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
       0.413
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.