STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iscUNifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins. (323 aa)    
Predicted Functional Partners:
iscS
Cysteine desulfurase/aminotransferase, IscS/NifS family; Pfam match to PF00266.10 Aminotran_5.
 
 0.999
csdA
Conserved hypothetical protein, putative NifS-like aminotransferase; Pfam match to PF00266.10 Aminotran_5.
  
 
 0.992
dnaK
Chaperone and heat shock protein 70; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.966
mrp
ATP/GTP-binding protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
  
 0.926
hup
DNA-binding protein HU; Pfam match to PF00216.12 Bac_DNA_binding; Belongs to the bacterial histone-like protein family.
   
  
 0.881
Cla_0942
Transcriptional regulator, BadM/Rrf2 family; Pfam match to PF02082.11 Rrf2.
  
  
 0.879
Cla_1403
4-oxalocrotonate tautomerase family protein; Pfam match to PF01361.12 Tautomerase; Belongs to the 4-oxalocrotonate tautomerase family.
     
 0.875
por
Pyruvate ferredoxin/flavodoxin oxidoreductase; Pfam matches to PF01855.10 POR_N, and to PF01558.9 POR.
  
  
 0.869
cccA
Cytochrome c family protein; Pfam match to PF00034.12 Cytochrom_C.
  
   
 0.852
nhaA1
Na+/H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.
    
 0.809
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.