cah protein (Campylobacter lari) - STRING interaction network

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Score

cah

Conserved hypothetical protein, putative carbonic anhydrase; Pfam match to PF00194.12 Carb_anhydrase. (246 aa)

Predicted Functional Partners:

cynT

0.923

rplR

0.808

rplE

0.750

rpoB

0.558

rpoC

0.558

pimT

0.542

rpsA

0.457

trmA

0.454

Your Current Organism:

Campylobacter lari

NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
cah	cynT	Cla_1514	Cla_1505	Conserved hypothetical protein, putative carbonic anhydrase; Pfam match to PF00194.12 Carb_anhydrase.	Carbonic anhydrase; Pfam match to PF00484.10 Pro_CA.	0.923
cah	pimT	Cla_1514	Cla_1513	Conserved hypothetical protein, putative carbonic anhydrase; Pfam match to PF00194.12 Carb_anhydrase.	protein-L-isoaspartate O-methyltransferase; Pfam match to PF01135.10 PCMT.	0.542
cah	rplE	Cla_1514	Cla_0071	Conserved hypothetical protein, putative carbonic anhydrase; Pfam match to PF00194.12 Carb_anhydrase.	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	0.750
cah	rplR	Cla_1514	Cla_0075	Conserved hypothetical protein, putative carbonic anhydrase; Pfam match to PF00194.12 Carb_anhydrase.	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.808
cah	rpoB	Cla_1514	Cla_0449	Conserved hypothetical protein, putative carbonic anhydrase; Pfam match to PF00194.12 Carb_anhydrase.	DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.558
cah	rpoC	Cla_1514	Cla_0450	Conserved hypothetical protein, putative carbonic anhydrase; Pfam match to PF00194.12 Carb_anhydrase.	DNA-directed RNA polymerase, beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.558
cah	rpsA	Cla_1514	Cla_1190	Conserved hypothetical protein, putative carbonic anhydrase; Pfam match to PF00194.12 Carb_anhydrase.	30S ribosomal protein S1; Pfam matches to PF00575.14 S1, and to PF00575.14 S1.	0.457
cah	trmA	Cla_1514	Cla_0969	Conserved hypothetical protein, putative carbonic anhydrase; Pfam match to PF00194.12 Carb_anhydrase.	tRNA (uracil-5-)-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA).	0.454
cynT	cah	Cla_1505	Cla_1514	Carbonic anhydrase; Pfam match to PF00484.10 Pro_CA.	Conserved hypothetical protein, putative carbonic anhydrase; Pfam match to PF00194.12 Carb_anhydrase.	0.923
pimT	cah	Cla_1513	Cla_1514	protein-L-isoaspartate O-methyltransferase; Pfam match to PF01135.10 PCMT.	Conserved hypothetical protein, putative carbonic anhydrase; Pfam match to PF00194.12 Carb_anhydrase.	0.542
rplE	cah	Cla_0071	Cla_1514	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	Conserved hypothetical protein, putative carbonic anhydrase; Pfam match to PF00194.12 Carb_anhydrase.	0.750
rplE	rplR	Cla_0071	Cla_0075	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.999
rplE	rpoB	Cla_0071	Cla_0449	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
rplE	rpoC	Cla_0071	Cla_0450	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	DNA-directed RNA polymerase, beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997
rplE	rpsA	Cla_0071	Cla_1190	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	30S ribosomal protein S1; Pfam matches to PF00575.14 S1, and to PF00575.14 S1.	0.980
rplR	cah	Cla_0075	Cla_1514	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	Conserved hypothetical protein, putative carbonic anhydrase; Pfam match to PF00194.12 Carb_anhydrase.	0.808
rplR	rplE	Cla_0075	Cla_0071	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.	0.999
rplR	rpoB	Cla_0075	Cla_0449	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997
rplR	rpoC	Cla_0075	Cla_0450	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	DNA-directed RNA polymerase, beta' chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997
rplR	rpsA	Cla_0075	Cla_1190	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	30S ribosomal protein S1; Pfam matches to PF00575.14 S1, and to PF00575.14 S1.	0.977

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