Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Cla_1524ABC transporter, ATP-binding protein; Pfam match to PF00005.18 ABC_tran; Belongs to the ABC transporter superfamily. (326 aa)    
Predicted Functional Partners:
Cla_1525
ABC transporter, permease protein; Pfam matches to PF00528.13 BPD_transp_1, and to PF00528.13 BPD_transp_1.
 
 0.997
Cla_1526
ABC transporter, periplasmic binding protein; Pfam match to PF01547.16 SBP_bac_1.
 
 
 0.988
modB
Molybdenum ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 0.761
cgb
Conserved hypothetical protein, putative flavohemoprotein; Pfam match to PF00042.13 Globin; Belongs to the globin family.
       0.598
fic
Cell filamentation protein; Pfam match to PF02661.9 Fic.
       0.597
dppF
Peptide ABC transporter, ATP-binding protein; Pfam match to PF00005.18 ABC_tran.
 
    
0.546
Cla_1522
Conserved hypothetical protein.
       0.507
putA
Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
  
  
 0.502
ftsY
Signal recognition particle-docking GTPase FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.
  
   
 0.485
rpsE
30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
     0.451
Your Current Organism:
Campylobacter lari
NCBI taxonomy Id: 306263
Other names: C. lari RM2100, Campylobacter lari RM2100, Campylobacter lari str. RM2100, Campylobacter lari strain RM2100
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