STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000317205_00143Unannotated protein. (81 aa)    
Predicted Functional Partners:
GCA_000317205_00142
Unannotated protein.
 
     0.906
GCA_000317205_00141
Unannotated protein.
 
     0.883
GCA_000317205_02889
Unannotated protein.
 
 
 0.825
GCA_000317205_04963
Unannotated protein.
     
 0.747
GCA_000317205_01673
Unannotated protein.
    
  0.735
GCA_000317205_03543
Unannotated protein.
  
 
 0.699
GCA_000317205_01894
Unannotated protein.
    
 0.620
GCA_000317205_02095
Unannotated protein.
    
 0.620
GCA_000317205_00060
Unannotated protein.
     
 0.611
GCA_000317205_00621
Unannotated protein.
    
  0.551
Your Current Organism:
Fischerella muscicola
NCBI taxonomy Id: 306281
Other names: F. muscicola PCC 7414, Fischerella muscicola PCC 7414, Fischerella sp. (strain PCC 7414), Fischerella sp. PCC 7414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.