STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000317205_00818Unannotated protein. (312 aa)    
Predicted Functional Partners:
GCA_000317205_03549
Unannotated protein.
  
  
 
0.656
GCA_000317205_02524
Unannotated protein.
  
  
 
0.637
GCA_000317205_03541
Unannotated protein.
 
  
 0.601
GCA_000317205_00817
Unannotated protein.
       0.592
GCA_000317205_02018
Unannotated protein.
  
     0.560
GCA_000317205_04136
Unannotated protein.
  
  
 0.418
GCA_000317205_04266
Unannotated protein.
  
  
 0.418
Your Current Organism:
Fischerella muscicola
NCBI taxonomy Id: 306281
Other names: F. muscicola PCC 7414, Fischerella muscicola PCC 7414, Fischerella sp. (strain PCC 7414), Fischerella sp. PCC 7414
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.