Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFO87601.1 | SFO87623.1 | SAMN05421839_1015 | SAMN05421839_1016 | Hypothetical protein. | Competence protein ComGA. | 0.538 |
SFO87601.1 | SFO87649.1 | SAMN05421839_1015 | SAMN05421839_1017 | Hypothetical protein. | Competence protein ComGB. | 0.538 |
SFO87601.1 | SFO87676.1 | SAMN05421839_1015 | SAMN05421839_1018 | Hypothetical protein. | Competence protein ComGC; Required for transformation and DNA binding. | 0.521 |
SFO87601.1 | SFO87696.1 | SAMN05421839_1015 | SAMN05421839_1019 | Hypothetical protein. | Competence protein ComGD. | 0.521 |
SFO87601.1 | SFO87714.1 | SAMN05421839_1015 | SAMN05421839_10110 | Hypothetical protein. | Hypothetical protein. | 0.521 |
SFO87601.1 | SFO87740.1 | SAMN05421839_1015 | SAMN05421839_10111 | Hypothetical protein. | Competence protein ComGF. | 0.521 |
SFO87601.1 | SFO87765.1 | SAMN05421839_1015 | SAMN05421839_10112 | Hypothetical protein. | ComG operon protein 7. | 0.521 |
SFO87601.1 | aroK | SAMN05421839_1015 | SAMN05421839_1014 | Hypothetical protein. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.773 |
SFO87623.1 | SFO87601.1 | SAMN05421839_1016 | SAMN05421839_1015 | Competence protein ComGA. | Hypothetical protein. | 0.538 |
SFO87623.1 | SFO87649.1 | SAMN05421839_1016 | SAMN05421839_1017 | Competence protein ComGA. | Competence protein ComGB. | 0.991 |
SFO87623.1 | SFO87676.1 | SAMN05421839_1016 | SAMN05421839_1018 | Competence protein ComGA. | Competence protein ComGC; Required for transformation and DNA binding. | 0.947 |
SFO87623.1 | SFO87696.1 | SAMN05421839_1016 | SAMN05421839_1019 | Competence protein ComGA. | Competence protein ComGD. | 0.784 |
SFO87623.1 | SFO87714.1 | SAMN05421839_1016 | SAMN05421839_10110 | Competence protein ComGA. | Hypothetical protein. | 0.746 |
SFO87623.1 | SFO87740.1 | SAMN05421839_1016 | SAMN05421839_10111 | Competence protein ComGA. | Competence protein ComGF. | 0.930 |
SFO87623.1 | SFO87765.1 | SAMN05421839_1016 | SAMN05421839_10112 | Competence protein ComGA. | ComG operon protein 7. | 0.746 |
SFO87623.1 | aroK | SAMN05421839_1016 | SAMN05421839_1014 | Competence protein ComGA. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.566 |
SFO87649.1 | SFO87601.1 | SAMN05421839_1017 | SAMN05421839_1015 | Competence protein ComGB. | Hypothetical protein. | 0.538 |
SFO87649.1 | SFO87623.1 | SAMN05421839_1017 | SAMN05421839_1016 | Competence protein ComGB. | Competence protein ComGA. | 0.991 |
SFO87649.1 | SFO87676.1 | SAMN05421839_1017 | SAMN05421839_1018 | Competence protein ComGB. | Competence protein ComGC; Required for transformation and DNA binding. | 0.965 |
SFO87649.1 | SFO87696.1 | SAMN05421839_1017 | SAMN05421839_1019 | Competence protein ComGB. | Competence protein ComGD. | 0.791 |
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