Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFO89509.1 | SFP25525.1 | SAMN05421839_10180 | SAMN05421839_11140 | Predicted O-methyltransferase YrrM. | Putative protease. | 0.803 |
SFO89509.1 | SFP25548.1 | SAMN05421839_10180 | SAMN05421839_11141 | Predicted O-methyltransferase YrrM. | Putative protease. | 0.855 |
SFO89509.1 | SFP46815.1 | SAMN05421839_10180 | SAMN05421839_12241 | Predicted O-methyltransferase YrrM. | Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | 0.730 |
SFO89509.1 | SFP51552.1 | SAMN05421839_10180 | SAMN05421839_12559 | Predicted O-methyltransferase YrrM. | NAD(P)H-binding. | 0.643 |
SFO89509.1 | SFP67088.1 | SAMN05421839_10180 | SAMN05421839_14018 | Predicted O-methyltransferase YrrM. | Pyrimidine-nucleoside phosphorylase. | 0.579 |
SFO89509.1 | metK | SAMN05421839_10180 | SAMN05421839_1545 | Predicted O-methyltransferase YrrM. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.659 |
SFO89509.1 | mltG | SAMN05421839_10180 | SAMN05421839_10181 | Predicted O-methyltransferase YrrM. | UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.668 |
SFO89509.1 | mtnN | SAMN05421839_10180 | SAMN05421839_10176 | Predicted O-methyltransferase YrrM. | Adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. | 0.680 |
SFO89509.1 | tdk | SAMN05421839_10180 | SAMN05421839_10411 | Predicted O-methyltransferase YrrM. | Thymidine kinase. | 0.682 |
SFO89509.1 | udk | SAMN05421839_10180 | SAMN05421839_10179 | Predicted O-methyltransferase YrrM. | Uridine kinase. | 0.901 |
SFP25525.1 | SFO89509.1 | SAMN05421839_11140 | SAMN05421839_10180 | Putative protease. | Predicted O-methyltransferase YrrM. | 0.803 |
SFP25525.1 | SFP25548.1 | SAMN05421839_11140 | SAMN05421839_11141 | Putative protease. | Putative protease. | 0.954 |
SFP25525.1 | udk | SAMN05421839_11140 | SAMN05421839_10179 | Putative protease. | Uridine kinase. | 0.479 |
SFP25548.1 | SFO89509.1 | SAMN05421839_11141 | SAMN05421839_10180 | Putative protease. | Predicted O-methyltransferase YrrM. | 0.855 |
SFP25548.1 | SFP25525.1 | SAMN05421839_11141 | SAMN05421839_11140 | Putative protease. | Putative protease. | 0.954 |
SFP25548.1 | udk | SAMN05421839_11141 | SAMN05421839_10179 | Putative protease. | Uridine kinase. | 0.811 |
SFP46815.1 | SFO89509.1 | SAMN05421839_12241 | SAMN05421839_10180 | Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Predicted O-methyltransferase YrrM. | 0.730 |
SFP46815.1 | SFP51552.1 | SAMN05421839_12241 | SAMN05421839_12559 | Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | NAD(P)H-binding. | 0.714 |
SFP46815.1 | SFP67088.1 | SAMN05421839_12241 | SAMN05421839_14018 | Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | Pyrimidine-nucleoside phosphorylase. | 0.516 |
SFP46815.1 | metK | SAMN05421839_12241 | SAMN05421839_1545 | Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.437 |
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