STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP02412.1Predicted dehydrogenase. (337 aa)    
Predicted Functional Partners:
SFP02391.1
Sugar phosphate isomerase/epimerase.
 
 
  0.970
SFP02370.1
Predicted dehydrogenase.
 
     0.895
SFP02434.1
Predicted dehydrogenase.
 
    
0.819
SFP02452.1
AraC-type DNA-binding protein.
  
    0.756
SFP72143.1
Sugar phosphate isomerase/epimerase.
  
 
  0.740
SFP79096.1
Predicted dehydrogenase.
  
  
  0.703
SFP44834.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.697
SFP01657.1
Sugar phosphate isomerase/epimerase.
  
 
  0.696
SFP47943.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
   
 
 0.676
SFP72071.1
Sugar phosphate isomerase/epimerase.
 
 
  0.673
Your Current Organism:
Halolactibacillus halophilus
NCBI taxonomy Id: 306540
Other names: DSM 17073, H. halophilus, Halolactibacillus halophilus Ishikawa et al. 2005, Halolactobacillus halophilus, IAM 15242, JCM 21694, NBRC 100868, NRIC 0628, strain M2-2
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