Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFP04596.1 | SFP04622.1 | SAMN05421839_10429 | SAMN05421839_10430 | mRNA interferase RelE/StbE. | Hypothetical protein. | 0.829 |
SFP04596.1 | SFP04644.1 | SAMN05421839_10429 | SAMN05421839_10431 | mRNA interferase RelE/StbE. | Hypothetical protein. | 0.417 |
SFP04622.1 | SFP04596.1 | SAMN05421839_10430 | SAMN05421839_10429 | Hypothetical protein. | mRNA interferase RelE/StbE. | 0.829 |
SFP04622.1 | SFP04644.1 | SAMN05421839_10430 | SAMN05421839_10431 | Hypothetical protein. | Hypothetical protein. | 0.417 |
SFP04644.1 | SFP04596.1 | SAMN05421839_10431 | SAMN05421839_10429 | Hypothetical protein. | mRNA interferase RelE/StbE. | 0.417 |
SFP04644.1 | SFP04622.1 | SAMN05421839_10431 | SAMN05421839_10430 | Hypothetical protein. | Hypothetical protein. | 0.417 |
SFP04644.1 | SFP04668.1 | SAMN05421839_10431 | SAMN05421839_10432 | Hypothetical protein. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.655 |
SFP04644.1 | uxaC | SAMN05421839_10431 | SAMN05421839_10434 | Hypothetical protein. | Glucuronate isomerase. | 0.464 |
SFP04644.1 | uxuA | SAMN05421839_10431 | SAMN05421839_10433 | Hypothetical protein. | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 0.560 |
SFP04668.1 | SFP04644.1 | SAMN05421839_10432 | SAMN05421839_10431 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.655 |
SFP04668.1 | uxaC | SAMN05421839_10432 | SAMN05421839_10434 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Glucuronate isomerase. | 0.947 |
SFP04668.1 | uxuA | SAMN05421839_10432 | SAMN05421839_10433 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 0.992 |
uxaC | SFP04644.1 | SAMN05421839_10434 | SAMN05421839_10431 | Glucuronate isomerase. | Hypothetical protein. | 0.464 |
uxaC | SFP04668.1 | SAMN05421839_10434 | SAMN05421839_10432 | Glucuronate isomerase. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.947 |
uxaC | uxuA | SAMN05421839_10434 | SAMN05421839_10433 | Glucuronate isomerase. | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 0.988 |
uxuA | SFP04644.1 | SAMN05421839_10433 | SAMN05421839_10431 | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | Hypothetical protein. | 0.560 |
uxuA | SFP04668.1 | SAMN05421839_10433 | SAMN05421839_10432 | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.992 |
uxuA | uxaC | SAMN05421839_10433 | SAMN05421839_10434 | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | Glucuronate isomerase. | 0.988 |