STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP05586.1O-acetylhomoserine (thiol)-lyase. (558 aa)    
Predicted Functional Partners:
metAA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
 
 
 0.794
SFP20857.1
Predicted CoA-binding protein.
   
  0.684
SFP14577.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
  0.675
SFP68458.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
  0.675
SFP71628.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
  0.675
SFP05614.1
Lysophospholipase L1.
    
  0.656
SFP20518.1
Glutamate synthase (NADPH/NADH) small chain.
   
 
  0.649
SFP32855.1
Serine O-acetyltransferase.
    
 0.608
SFP12883.1
Cystathionine beta-lyase/cystathionine gamma-synthase.
 
 
0.607
SFP71258.1
Homoserine dehydrogenase.
  
 
 0.589
Your Current Organism:
Halolactibacillus halophilus
NCBI taxonomy Id: 306540
Other names: DSM 17073, H. halophilus, Halolactibacillus halophilus Ishikawa et al. 2005, Halolactobacillus halophilus, IAM 15242, JCM 21694, NBRC 100868, NRIC 0628, strain M2-2
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