STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP10409.1Hypothetical protein. (88 aa)    
Predicted Functional Partners:
SFP10379.1
Phage head-tail adaptor, putative, SPP1 family.
       0.800
SFP10310.1
Hypothetical protein.
       0.773
SFP10344.1
Bacteriophage HK97-gp10, putative tail-component.
       0.773
SFP10441.1
Hypothetical protein.
       0.762
SFP10275.1
Hypothetical protein.
       0.762
SFP10247.1
Hypothetical protein.
       0.588
SFP10462.1
Phage major capsid protein, HK97 family.
       0.569
SFP10519.1
Hypothetical protein.
       0.569
SFP10548.1
Phage portal protein, HK97 family.
       0.569
SFP10170.1
Hypothetical protein.
       0.491
Your Current Organism:
Halolactibacillus halophilus
NCBI taxonomy Id: 306540
Other names: DSM 17073, H. halophilus, Halolactibacillus halophilus Ishikawa et al. 2005, Halolactobacillus halophilus, IAM 15242, JCM 21694, NBRC 100868, NRIC 0628, strain M2-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.