STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP11416.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
SFP11382.1
Hypothetical protein.
 
     0.953
SFP76360.1
Putative phage tail component, N-terminal domain-containing protein.
  
     0.688
SFP11443.1
Hypothetical protein.
       0.586
SFP11323.1
Phage replisome organizer, putative, N-terminal region.
       0.547
SFP76388.1
Phage minor structural protein, N-terminal region.
  
     0.540
SFP50710.1
DnaD and phage-associated domain-containing protein.
 
     0.530
SFP11352.1
Protein of unknown function.
       0.527
SFP11291.1
DNA replication protein DnaC.
       0.498
SFP11470.1
Hypothetical protein.
       0.438
SFP11507.1
Hypothetical protein.
       0.438
Your Current Organism:
Halolactibacillus halophilus
NCBI taxonomy Id: 306540
Other names: DSM 17073, H. halophilus, Halolactibacillus halophilus Ishikawa et al. 2005, Halolactobacillus halophilus, IAM 15242, JCM 21694, NBRC 100868, NRIC 0628, strain M2-2
Server load: low (32%) [ZH]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.