STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP17452.1Putative cell-wall binding lipoprotein. (217 aa)    
Predicted Functional Partners:
SFO98007.1
Flagellar FliJ protein.
  
    0.831
SFO97961.1
Hook-length control protein FliK.
 
     0.776
SFO87903.1
Hypothetical protein.
  
     0.764
SFO99928.1
Cell division protein FtsL.
  
     0.764
SFP36616.1
Scaffold protein Nfu/NifU N terminal.
  
     0.764
SFO97318.1
Hypothetical protein.
  
     0.756
SFO97820.1
Flagellar FliL protein.
 
    0.753
SFP40846.1
Nuclease-related domain-containing protein.
  
     0.753
SFP08375.1
Hypothetical protein.
  
     0.750
SFP47974.1
Potassium channel LctB.
  
     0.746
Your Current Organism:
Halolactibacillus halophilus
NCBI taxonomy Id: 306540
Other names: DSM 17073, H. halophilus, Halolactibacillus halophilus Ishikawa et al. 2005, Halolactobacillus halophilus, IAM 15242, JCM 21694, NBRC 100868, NRIC 0628, strain M2-2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.