STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP23207.1Hypothetical protein. (428 aa)    
Predicted Functional Partners:
SFP23233.1
Raffinose/stachyose/melibiose transport system permease protein.
       0.771
SFP23257.1
Raffinose/stachyose/melibiose transport system permease protein.
       0.768
SFP23154.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
       0.728
SFP23186.1
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
       0.726
SFP23277.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
       0.704
SFP41740.1
Mannosylglycerate hydrolase.
    0.648
SFP01434.1
Beta-mannosidase; Belongs to the glycosyl hydrolase 2 family.
 
     0.602
SFP23301.1
Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains.
 
    0.528
SFP23136.1
Glucokinase.
       0.483
SFP23327.1
Two-component system, sensor histidine kinase YesM.
       0.449
Your Current Organism:
Halolactibacillus halophilus
NCBI taxonomy Id: 306540
Other names: DSM 17073, H. halophilus, Halolactibacillus halophilus Ishikawa et al. 2005, Halolactobacillus halophilus, IAM 15242, JCM 21694, NBRC 100868, NRIC 0628, strain M2-2
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