STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP42590.1lactose/L-arabinose transport system permease protein. (275 aa)    
Predicted Functional Partners:
SFP42567.1
lactose/L-arabinose transport system permease protein.
  0.992
SFP12621.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.969
SFP42544.1
lactose/L-arabinose transport system substrate-binding protein.
 
  0.966
SFP44010.1
Multiple sugar transport system permease protein.
 
  0.923
SFP23257.1
Raffinose/stachyose/melibiose transport system permease protein.
 
  0.922
SFP01626.1
Multiple sugar transport system permease protein.
 
  0.919
SFP04984.1
ABC-type sugar transport system, permease component.
  
  0.909
SFP57904.1
Putative aldouronate transport system permease protein.
 
 0.891
SFP72278.1
Raffinose/stachyose/melibiose transport system permease protein.
 
  0.881
SFP23277.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
 
 0.880
Your Current Organism:
Halolactibacillus halophilus
NCBI taxonomy Id: 306540
Other names: DSM 17073, H. halophilus, Halolactibacillus halophilus Ishikawa et al. 2005, Halolactobacillus halophilus, IAM 15242, JCM 21694, NBRC 100868, NRIC 0628, strain M2-2
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