Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFO99037.1 | SFP46591.1 | SAMN05421839_102162 | SAMN05421839_12230 | Thiamine pyrophosphokinase. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.551 |
SFO99037.1 | SFP66890.1 | SAMN05421839_102162 | SAMN05421839_1409 | Thiamine pyrophosphokinase. | Pyridoxine kinase. | 0.551 |
SFO99037.1 | SFP76936.1 | SAMN05421839_102162 | SAMN05421839_1593 | Thiamine pyrophosphokinase. | Thiaminase (transcriptional activator TenA); Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | 0.630 |
SFO99037.1 | thiL | SAMN05421839_102162 | SAMN05421839_1621 | Thiamine pyrophosphokinase. | Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.614 |
SFP29852.1 | SFP46591.1 | SAMN05421839_11319 | SAMN05421839_12230 | ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.531 |
SFP29852.1 | SFP66890.1 | SAMN05421839_11319 | SAMN05421839_1409 | ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family. | Pyridoxine kinase. | 0.531 |
SFP29852.1 | thiL | SAMN05421839_11319 | SAMN05421839_1621 | ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family. | Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.594 |
SFP46530.1 | SFP46591.1 | SAMN05421839_12227 | SAMN05421839_12230 | Protease I. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.585 |
SFP46530.1 | thiE | SAMN05421839_12227 | SAMN05421839_12228 | Protease I. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.850 |
SFP46530.1 | thiM | SAMN05421839_12227 | SAMN05421839_12229 | Protease I. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.551 |
SFP46591.1 | SFO99037.1 | SAMN05421839_12230 | SAMN05421839_102162 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Thiamine pyrophosphokinase. | 0.551 |
SFP46591.1 | SFP29852.1 | SAMN05421839_12230 | SAMN05421839_11319 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | ADP-ribose pyrophosphatase; Belongs to the Nudix hydrolase family. | 0.531 |
SFP46591.1 | SFP46530.1 | SAMN05421839_12230 | SAMN05421839_12227 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Protease I. | 0.585 |
SFP46591.1 | SFP66890.1 | SAMN05421839_12230 | SAMN05421839_1409 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Pyridoxine kinase. | 0.612 |
SFP46591.1 | SFP76936.1 | SAMN05421839_12230 | SAMN05421839_1593 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Thiaminase (transcriptional activator TenA); Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | 0.995 |
SFP46591.1 | pdxS | SAMN05421839_12230 | SAMN05421839_13717 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Pyridoxal 5'-phosphate synthase pdxS subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. | 0.546 |
SFP46591.1 | pdxT | SAMN05421839_12230 | SAMN05421839_13716 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 5'-phosphate synthase pdxT subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. | 0.529 |
SFP46591.1 | thiE | SAMN05421839_12230 | SAMN05421839_12228 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.999 |
SFP46591.1 | thiL | SAMN05421839_12230 | SAMN05421839_1621 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.613 |
SFP46591.1 | thiM | SAMN05421839_12230 | SAMN05421839_12229 | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.998 |
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