Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFO89763.1 | SFO89795.1 | SAMN05421839_10190 | SAMN05421839_10191 | Cysteine desulfurase. | Rrf2 family transcriptional regulator, cysteine metabolism repressor. | 0.961 |
SFO89763.1 | SFP55723.1 | SAMN05421839_10190 | SAMN05421839_12832 | Cysteine desulfurase. | Fe-S cluster assembly ATP-binding protein. | 0.531 |
SFO89763.1 | SFP55744.1 | SAMN05421839_10190 | SAMN05421839_12833 | Cysteine desulfurase. | Fe-S cluster assembly protein SufD. | 0.467 |
SFO89763.1 | SFP55769.1 | SAMN05421839_10190 | SAMN05421839_12834 | Cysteine desulfurase. | Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.574 |
SFO89763.1 | SFP55787.1 | SAMN05421839_10190 | SAMN05421839_12835 | Cysteine desulfurase. | Nitrogen fixation protein NifU. | 0.989 |
SFO89763.1 | SFP55814.1 | SAMN05421839_10190 | SAMN05421839_12836 | Cysteine desulfurase. | Iron-regulated ABC transporter membrane component SufB. | 0.467 |
SFO89763.1 | SFP71362.1 | SAMN05421839_10190 | SAMN05421839_14614 | Cysteine desulfurase. | Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family. | 0.705 |
SFO89763.1 | dnaK | SAMN05421839_10190 | SAMN05421839_10158 | Cysteine desulfurase. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.665 |
SFO89795.1 | SFO89763.1 | SAMN05421839_10191 | SAMN05421839_10190 | Rrf2 family transcriptional regulator, cysteine metabolism repressor. | Cysteine desulfurase. | 0.961 |
SFO89795.1 | SFO92781.1 | SAMN05421839_10191 | SAMN05421839_101223 | Rrf2 family transcriptional regulator, cysteine metabolism repressor. | Cysteine desulfurase. | 0.862 |
SFO89795.1 | SFP07664.1 | SAMN05421839_10191 | SAMN05421839_10541 | Rrf2 family transcriptional regulator, cysteine metabolism repressor. | Cysteine desulfurase. | 0.862 |
SFO89795.1 | SFP55787.1 | SAMN05421839_10191 | SAMN05421839_12835 | Rrf2 family transcriptional regulator, cysteine metabolism repressor. | Nitrogen fixation protein NifU. | 0.862 |
SFO89795.1 | SFP71362.1 | SAMN05421839_10191 | SAMN05421839_14614 | Rrf2 family transcriptional regulator, cysteine metabolism repressor. | Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family. | 0.489 |
SFO92781.1 | SFO89795.1 | SAMN05421839_101223 | SAMN05421839_10191 | Cysteine desulfurase. | Rrf2 family transcriptional regulator, cysteine metabolism repressor. | 0.862 |
SFO92781.1 | SFP55723.1 | SAMN05421839_101223 | SAMN05421839_12832 | Cysteine desulfurase. | Fe-S cluster assembly ATP-binding protein. | 0.531 |
SFO92781.1 | SFP55744.1 | SAMN05421839_101223 | SAMN05421839_12833 | Cysteine desulfurase. | Fe-S cluster assembly protein SufD. | 0.467 |
SFO92781.1 | SFP55769.1 | SAMN05421839_101223 | SAMN05421839_12834 | Cysteine desulfurase. | Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.594 |
SFO92781.1 | SFP55787.1 | SAMN05421839_101223 | SAMN05421839_12835 | Cysteine desulfurase. | Nitrogen fixation protein NifU. | 0.988 |
SFO92781.1 | SFP55814.1 | SAMN05421839_101223 | SAMN05421839_12836 | Cysteine desulfurase. | Iron-regulated ABC transporter membrane component SufB. | 0.467 |
SFO92781.1 | SFP71362.1 | SAMN05421839_101223 | SAMN05421839_14614 | Cysteine desulfurase. | Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family. | 0.699 |
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