STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP60569.1Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (347 aa)    
Predicted Functional Partners:
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 0.987
SFP60623.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
 0.985
galT
UDPglucose--hexose-1-phosphate uridylyltransferase.
 
  
 0.880
SFP42632.1
Beta-galactosidase.
 
 
 0.799
SFP22945.1
PTS system, sucrose-specific IIC component.
  
 
 0.777
SFP49363.1
PTS system, D-glucosamine-specific IIC component/PTS system, maltose and glucose-specific IIC component.
  
 
 0.777
SFP49503.1
PTS system, beta-glucosides-specific IIC component.
  
 
 0.777
SFP52840.1
PTS system, D-glucosamine-specific IIC component.
  
 
 0.777
SFP59981.1
PTS system, beta-glucosides-specific IIC component.
  
 
 0.777
SFP60021.1
PTS system, beta-glucosides-specific IIC component.
  
 
 0.777
Your Current Organism:
Halolactibacillus halophilus
NCBI taxonomy Id: 306540
Other names: DSM 17073, H. halophilus, Halolactibacillus halophilus Ishikawa et al. 2005, Halolactobacillus halophilus, IAM 15242, JCM 21694, NBRC 100868, NRIC 0628, strain M2-2
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