STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP75757.1Uncharacterized surface anchored protein. (1670 aa)    
Predicted Functional Partners:
SFP75735.1
LPXTG-motif cell wall anchor domain-containing protein.
     0.990
SFO92367.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
    0.988
SFP38517.1
Signal transduction histidine kinase.
  
     0.758
SFP56873.1
Multiple sugar transport system substrate-binding protein.
  
     0.739
SFP54307.1
Protein of unknown function.
  
     0.704
SFP40734.1
Transposase.
  
     0.691
SFP22739.1
HIRAN domain-containing protein.
  
     0.687
SFP38544.1
Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains.
  
     0.681
SFP40707.1
Transposase.
  
     0.591
SFP38563.1
LPXTG-site transpeptidase (sortase) family protein.
 
  
 0.581
Your Current Organism:
Halolactibacillus halophilus
NCBI taxonomy Id: 306540
Other names: DSM 17073, H. halophilus, Halolactibacillus halophilus Ishikawa et al. 2005, Halolactobacillus halophilus, IAM 15242, JCM 21694, NBRC 100868, NRIC 0628, strain M2-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.