Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFP03914.1 | SFP80564.1 | SAMN05421839_1041 | SAMN05421839_1741 | Asparagine synthase (glutamine-hydrolysing). | Asparagine synthase (glutamine-hydrolysing). | 0.976 |
SFP03914.1 | SFP80586.1 | SAMN05421839_1041 | SAMN05421839_1742 | Asparagine synthase (glutamine-hydrolysing). | Uncharacterized protein YvpB. | 0.624 |
SFP03914.1 | guaA | SAMN05421839_1041 | SAMN05421839_12433 | Asparagine synthase (glutamine-hydrolysing). | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.462 |
SFP42002.1 | SFP80586.1 | SAMN05421839_11917 | SAMN05421839_1742 | SOS regulatory protein LexA; Represses a number of genes involved in the response to DNA damage (SOS response); Belongs to the helicase family. UvrD subfamily. | Uncharacterized protein YvpB. | 0.459 |
SFP43346.1 | SFP80586.1 | SAMN05421839_12010 | SAMN05421839_1742 | Flagellar hook-associated protein 3 FlgL; Belongs to the bacterial flagellin family. | Uncharacterized protein YvpB. | 0.556 |
SFP80564.1 | SFP03914.1 | SAMN05421839_1741 | SAMN05421839_1041 | Asparagine synthase (glutamine-hydrolysing). | Asparagine synthase (glutamine-hydrolysing). | 0.976 |
SFP80564.1 | SFP80586.1 | SAMN05421839_1741 | SAMN05421839_1742 | Asparagine synthase (glutamine-hydrolysing). | Uncharacterized protein YvpB. | 0.636 |
SFP80564.1 | guaA | SAMN05421839_1741 | SAMN05421839_12433 | Asparagine synthase (glutamine-hydrolysing). | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.462 |
SFP80586.1 | SFP03914.1 | SAMN05421839_1742 | SAMN05421839_1041 | Uncharacterized protein YvpB. | Asparagine synthase (glutamine-hydrolysing). | 0.624 |
SFP80586.1 | SFP42002.1 | SAMN05421839_1742 | SAMN05421839_11917 | Uncharacterized protein YvpB. | SOS regulatory protein LexA; Represses a number of genes involved in the response to DNA damage (SOS response); Belongs to the helicase family. UvrD subfamily. | 0.459 |
SFP80586.1 | SFP43346.1 | SAMN05421839_1742 | SAMN05421839_12010 | Uncharacterized protein YvpB. | Flagellar hook-associated protein 3 FlgL; Belongs to the bacterial flagellin family. | 0.556 |
SFP80586.1 | SFP80564.1 | SAMN05421839_1742 | SAMN05421839_1741 | Uncharacterized protein YvpB. | Asparagine synthase (glutamine-hydrolysing). | 0.636 |
SFP80586.1 | guaA | SAMN05421839_1742 | SAMN05421839_12433 | Uncharacterized protein YvpB. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.410 |
SFP80586.1 | upp | SAMN05421839_1742 | SAMN05421839_1743 | Uncharacterized protein YvpB. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.422 |
guaA | SFP03914.1 | SAMN05421839_12433 | SAMN05421839_1041 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | Asparagine synthase (glutamine-hydrolysing). | 0.462 |
guaA | SFP80564.1 | SAMN05421839_12433 | SAMN05421839_1741 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | Asparagine synthase (glutamine-hydrolysing). | 0.462 |
guaA | SFP80586.1 | SAMN05421839_12433 | SAMN05421839_1742 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | Uncharacterized protein YvpB. | 0.410 |
guaA | upp | SAMN05421839_12433 | SAMN05421839_1743 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.991 |
upp | SFP80586.1 | SAMN05421839_1743 | SAMN05421839_1742 | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | Uncharacterized protein YvpB. | 0.422 |
upp | guaA | SAMN05421839_1743 | SAMN05421839_12433 | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.991 |