STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS47683.1Hypothetical protein. (194 aa)    
Predicted Functional Partners:
SFS58352.1
Ribose transport system substrate-binding protein.
  
  
  0.517
SFS58889.1
CAAX protease self-immunity.
  
     0.510
SFS77091.1
Acetoin utilization transport system permease protein.
  
     0.487
SFS47698.1
Adenylate kinase.
       0.479
SFT09385.1
Hypothetical protein.
  
     0.424
SFS94719.1
Radical SAM additional 4Fe4S-binding SPASM domain-containing protein.
  
     0.419
Your Current Organism:
Halolactibacillus miurensis
NCBI taxonomy Id: 306541
Other names: DSM 17074, H. miurensis, Halolactibacillus miurensis Ishikawa et al. 2005, IAM 15247, JCM 21699, NBRC 100873, NRIC 0633, strain M23-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.