Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS37027.1 | SFS43598.1 | SAMN05421668_101297 | SAMN05421668_102195 | Aminotransferase. | Aspartate kinase; Belongs to the aspartokinase family. | 0.508 |
SFS37027.1 | SFS48465.1 | SAMN05421668_101297 | SAMN05421668_103163 | Aminotransferase. | Acetylornithine aminotransferase. | 0.528 |
SFS37027.1 | SFS59780.1 | SAMN05421668_101297 | SAMN05421668_105135 | Aminotransferase. | Aminotransferase. | 0.547 |
SFS37027.1 | SFS59826.1 | SAMN05421668_101297 | SAMN05421668_105139 | Aminotransferase. | N-acetyldiaminopimelate deacetylase; Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate. | 0.629 |
SFS37027.1 | dapA | SAMN05421668_101297 | SAMN05421668_11217 | Aminotransferase. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.610 |
SFS37027.1 | dapB | SAMN05421668_101297 | SAMN05421668_11128 | Aminotransferase. | 4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.718 |
SFS37027.1 | dapH | SAMN05421668_101297 | SAMN05421668_105138 | Aminotransferase. | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate. | 0.677 |
SFS37027.1 | lysA | SAMN05421668_101297 | SAMN05421668_102218 | Aminotransferase. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.715 |
SFS43598.1 | SFS37027.1 | SAMN05421668_102195 | SAMN05421668_101297 | Aspartate kinase; Belongs to the aspartokinase family. | Aminotransferase. | 0.508 |
SFS43598.1 | SFS59780.1 | SAMN05421668_102195 | SAMN05421668_105135 | Aspartate kinase; Belongs to the aspartokinase family. | Aminotransferase. | 0.617 |
SFS43598.1 | asd | SAMN05421668_102195 | SAMN05421668_104137 | Aspartate kinase; Belongs to the aspartokinase family. | Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.979 |
SFS43598.1 | dapA | SAMN05421668_102195 | SAMN05421668_11217 | Aspartate kinase; Belongs to the aspartokinase family. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.817 |
SFS43598.1 | dapB | SAMN05421668_102195 | SAMN05421668_11128 | Aspartate kinase; Belongs to the aspartokinase family. | 4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.774 |
SFS43598.1 | dapH | SAMN05421668_102195 | SAMN05421668_105138 | Aspartate kinase; Belongs to the aspartokinase family. | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate. | 0.672 |
SFS43598.1 | guaA | SAMN05421668_102195 | SAMN05421668_1184 | Aspartate kinase; Belongs to the aspartokinase family. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.689 |
SFS43598.1 | lysA | SAMN05421668_102195 | SAMN05421668_102218 | Aspartate kinase; Belongs to the aspartokinase family. | Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.842 |
SFS48465.1 | SFS37027.1 | SAMN05421668_103163 | SAMN05421668_101297 | Acetylornithine aminotransferase. | Aminotransferase. | 0.528 |
SFS48465.1 | SFS59780.1 | SAMN05421668_103163 | SAMN05421668_105135 | Acetylornithine aminotransferase. | Aminotransferase. | 0.509 |
SFS48465.1 | dapA | SAMN05421668_103163 | SAMN05421668_11217 | Acetylornithine aminotransferase. | 4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.445 |
SFS48465.1 | dapB | SAMN05421668_103163 | SAMN05421668_11128 | Acetylornithine aminotransferase. | 4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.404 |
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