STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS79491.1Two-component system, response regulator YesN. (337 aa)    
Predicted Functional Partners:
SFT03727.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.907
SFS46003.1
Two-component system, OmpR family, KDP operon response regulator KdpE/two-component system, OmpR family, response regulator MtrA.
 
 
 0.860
SFS50955.1
Two-component system, chemotaxis family, sensor kinase CheA.
  
 0.842
SFT03739.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.836
SFS50755.1
Flagellar motor switch protein FliM.
  
 0.830
SFS79512.1
PAS domain S-box-containing protein.
 
     0.823
SFS50769.1
Flagellar motor switch protein FliN/FliY.
  
 0.821
SFS83486.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.802
SFS73455.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.747
SFS94140.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  
  0.745
Your Current Organism:
Halolactibacillus miurensis
NCBI taxonomy Id: 306541
Other names: DSM 17074, H. miurensis, Halolactibacillus miurensis Ishikawa et al. 2005, IAM 15247, JCM 21699, NBRC 100873, NRIC 0633, strain M23-1
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