STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS87282.1Major Facilitator Superfamily protein. (391 aa)    
Predicted Functional Partners:
SFS64477.1
Para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase.
   
 
 0.680
SFT07498.1
Major Facilitator Superfamily protein.
  
    0.599
SFS50091.1
L-serine dehydratase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
   
 
 0.572
SFT07602.1
Hypothetical protein.
  
     0.509
asnS
asparaginyl-tRNA synthetase.
    
  0.496
SFS62859.1
Homoserine dehydrogenase.
   
  0.488
SFS87297.1
Potassium channel LctB.
 
   
 0.483
SFT07989.1
G-rich domain on putative tyrosine kinase.
  
     0.467
SFS77078.1
Protein of unknown function.
  
   
 0.465
SFS34619.1
Sugar phosphate permease.
    
 0.450
Your Current Organism:
Halolactibacillus miurensis
NCBI taxonomy Id: 306541
Other names: DSM 17074, H. miurensis, Halolactibacillus miurensis Ishikawa et al. 2005, IAM 15247, JCM 21699, NBRC 100873, NRIC 0633, strain M23-1
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